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Comment: GSVA on RNAseq data by Robert Castelo ★ 3.4k
Hi Bob, I have not investigated whether a particular unit of expression works better than others, but using logTPM or logCPM units of expr…
Answer: Store Matrix in DataFrame Cell by James W. MacDonald 68k
Put it in a list and put the list in a column.
Comment: For some reason I can't update BiocManager to 3.20 by James W. MacDonald 68k
Please post output from starting R and then running `sessionInfo()` (as requested by the web form you use to post questions). I get ``` > …
Comment: p-value the same for different contrasts DESeq2 by caroline.zanchi • 0
It would be great if it were possible to do something similar using GlmGamPoi !
Comment: Web accessibility of Bioconductor.org by Sean Davis 21k
Added issue to website github repo: https://github.com/Bioconductor/bioconductor.org/issues/304
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A: Rtracklayer fails to export TxDb as GFF3 without CDS
Comment: plyranges: find exact GRanges match keeping metadata columns
Answer: Store Matrix in DataFrame Cell
Store Matrix in DataFrame Cell
A: how to extract Granges not overlapping with other ganges?
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